Bacterial DNA in mixed cholesterol gallstones

Dong Ki Lee, Phillip I. Tarr, W. Geoffrey Haigh, Sum P. Lee

Research output: Contribution to journalArticlepeer-review

47 Citations (Scopus)


OBJECTIVE: Numerous investigators have proposed a role for bacteria in biliary lithogenesis. We hypothesized that bacterial DNA is present in gallstones, and that Categorical differences exist between gallstone type and the frequency of bacterial sequences. METHODS: Polymerase chain reaction (PCR) was used to amplify bacterial 16S rRNA and uidA (encoding Escherichia coli [E. coli] β-glucuronidase) genes in different types of gallstones. PCR products were sequenced. RESULTS: Bacterial 16S rRNA and uidA DNA sequences in E. coli were detected in all brown pigment, common bile duct, and mixed cholesterol gallstones (n = 14). In contrast, only one (14%) of seven pure cholesterol gallstones yielded a PCR product. Most (88%) mixed cholesterol gallstones yielded PCR amplification products from their central, as well as their outer, portions. Sequenced products possessed 88-98% identity to 16S rRNA genes of E. coli and Pseudomonas species. CONCLUSIONS: Bacterial DNA sequences are usually present in mixed cholesterol (to 95% cholesterol content), brown pigment, and common bile duct, but rarely in pure cholesterol gallstones. The presence of bacterial β-glucuronidase is also suggested. The role of bacteria and their products in the formation of mixed cholesterol gallstones, which comprise the majority of cholesterol gallstones, warrants further study.

Original languageEnglish
Pages (from-to)3502-3506
Number of pages5
JournalAmerican Journal of Gastroenterology
Issue number12
Publication statusPublished - 1999 Dec

Bibliographical note

Funding Information:
We thank Mr. Kan Lam for microbiological analysis, Dr. Harry Yim for scientific advice, Ms. Yoo-Lee Yea for technical support, and Ms. Christine A. Merrikin for secretarial assistance. Dr. Sum P. Lee is supported in part by the Medical Research Service of the Department of Veterans Affairs.

All Science Journal Classification (ASJC) codes

  • Hepatology
  • Gastroenterology


Dive into the research topics of 'Bacterial DNA in mixed cholesterol gallstones'. Together they form a unique fingerprint.

Cite this